Proteome 2D-PAGE Database - Software Tools
| Program | Description | Download |
TopSpot©
|
Scanning the gel, editing the spots and saving the information | TopSpot.zip |
Fragmentation©
|
Fragmentation of the gel image into sections | Fragmentation.zip |
| MS-Screener© | Perl script to compare the similarity of MALDI-PMF peaklists | MS-Screener.zip |
| MS-Screener© update | MS-Screener can be used to compare mass spectra (MALDI-MS(/MS) as well as ESI-MS/MS spectra) on the basis of their peak lists (.dta, .pkm, .pkt, or .txt files), to recalibrate mass spectra, to determine and eliminate exogenous contaminant peaks, and to create matrices for cluster analyses. | |
| GelCali | Calibration of the pI and Mr-axis of 2-DE gels using linear and logarithmic regression using R |